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34f497e157 ... 04fb4d2fdb

Author SHA1 Message Date
Kuoi
04fb4d2fdb !28 fix: depends missing, close #I5P37B 
From: @malacology 
Reviewed-by: @reganhe_xx 
Signed-off-by: @reganhe_xx
 2023-06-03 04:43:17 +00:00
openeuler-ci-bot
260c2732a4
!25 fix separator spell error 
From: @reganhe_xx 
Reviewed-by: @yangzhao_kl 
Signed-off-by: @yangzhao_kl
 2022-04-12 09:57:24 +00:00
herengui
07c5fb7310 fix separator spell error 
Signed-off-by: herengui <herengui@uniontech.com>
 2022-04-07 19:02:11 +08:00
openeuler-ci-bot
e52c477630
!20 [sync] PR-18: 修复编译失败问题 
From: @openeuler-sync-bot 
Reviewed-by: @reganhe_xx 
Signed-off-by: @reganhe_xx
 2022-03-11 05:33:23 +00:00
herengui
633d486345 fix build issues 
Signed-off-by: herengui <herengui@uniontech.com>
(cherry picked from commit 360728b76b81012d8d640013d4d9c741b6a169a4)
 2022-03-11 10:05:56 +08:00
openeuler-ci-bot
05b6699e1d
!14 [sync] PR-11: rebuild for htslib version updated 
Merge pull request !14 from openeuler-sync-bot/sync-pr11-openEuler-20.03-LTS-SP3-to-master
 2022-02-09 02:29:49 +00:00
herengui
be76bbec43 rebuild for htslib version updated 
Signed-off-by: herengui <herengui@uniontech.com>
(cherry picked from commit f1b8816ab4722351bd23acd947fa5dff6014f4cd)
 2022-02-09 10:02:54 +08:00
openeuler-ci-bot
78d2bc2297 !7 添加yaml文件到仓库 
From: @xiangbudaomz
Reviewed-by: @yangzhao_kl
Signed-off-by: @yangzhao_kl
 2021-07-21 07:49:59 +00:00
zouzhimin
64cd2a23db add yaml file 2021-07-21 15:27:05 +08:00
openeuler-ci-bot
7c4c11125f !4 移除多余的编译依赖 
From: @reganhe_xx
Reviewed-by: @yangzhao_kl
Signed-off-by: @yangzhao_kl
 2021-07-21 07:14:11 +00:00
He Rengui
2f112642e6 remove useless buildrequires 
Signed-off-by: He Rengui <herengui@uniontech.com>
 2021-07-20 15:40:51 +08:00
4 changed files with 26 additions and 18 deletions
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samtools-1.12.tar.bz2
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samtools-1.17.tar.bz2 Normal file
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40
samtools.spec
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@ -1,12 +1,12 @@
Name: samtools Name: samtools
Version: 1.12 Version: 1.17
Release: 2 Release: 1
Summary: Tools (written in C using htslib) for manipulating next-generation sequencing data Summary: Tools (written in C using htslib) for manipulating next-generation sequencing data
License: MIT and BSD License: MIT and BSD
URL: http://www.htslib.org URL: http://www.htslib.org
Source0: https://github.com/samtools/samtools/archive/%{name}-%{version}.tar.bz2 Source0: https://github.com/samtools/samtools/archive/%{name}-%{version}.tar.bz2
BuildRequires: gcc gdb autoconf automake make zlib-devel htslib-devel perl-Getopt-Long ncurses-devel bzip2-devel xz-devel BuildRequires: gcc autoconf automake make zlib-devel htslib-devel ncurses-devel bzip2-devel xz-devel
%description %description
The original samtools package has been split into three separate but tightly coordinated projects: The original samtools package has been split into three separate but tightly coordinated projects:
@ -15,16 +15,16 @@ The original samtools package has been split into three separate but tightly coo
bcftools: calling and other tools for handling VCF, BCF bcftools: calling and other tools for handling VCF, BCF
See also http://github.com/samtools/ See also http://github.com/samtools/
%package devel %package devel
Summary: Header files and libraries for compiling against %{name} Summary: Header files and libraries for compiling against %{name}
Group: Development/Libraries Group: Development/Libraries
Requires: %{name} = %{version}-%{release} Requires: %{name} = %{version}-%{release}
%description devel %description devel
Header files and libraries for compiling against %{name} Header files and libraries for compiling against %{name}
%prep %prep
%setup -q -n %{name}-%{version} %autosetup
%build %build
autoheader autoheader
@ -36,14 +36,6 @@ autoconf -Wno-syntax
%make_install %make_install
install -d -m 0755 %{buildroot}%{_includedir}/bam install -d -m 0755 %{buildroot}%{_includedir}/bam
install -p -m 0644 *.h %{buildroot}%{_includedir}/bam install -p -m 0644 *.h %{buildroot}%{_includedir}/bam
install -D -p -m 0755 libbam.a %{buildroot}%{_libdir}/libbam.a
%pre
%preun
%post
%postun
%check
%files %files
%license LICENSE %license LICENSE
@ -54,9 +46,21 @@ install -D -p -m 0755 libbam.a %{buildroot}%{_libdir}/libbam.a
%files devel %files devel
%defattr(-,root,root,-) %defattr(-,root,root,-)
%{_includedir}/bam %{_includedir}/bam
%{_libdir}/libbam.a
%changelog %changelog
* Thu May 25 2023 guoyizhang <kuoi@bioarchlinux.org> - 1.17-1
- update: 1.17
* Thu Mar 10 2022 herengui <herengui@uniontech.com> - 1.12-5
- fix build error
* Tue Feb 08 2022 herengui <herengui@uniontech.com> - 1.12-4
- rebuild for htslib version updated.
* Tue Jul 20 2021 herengui <herengui@uniontech.com> - 1.12-3
- remove useless buildrequires.
- replace tab with space
* Thu Mar 25 2021 herengui <herengui@uniontech.com> - 1.12-2 * Thu Mar 25 2021 herengui <herengui@uniontech.com> - 1.12-2
- Add devel package - Add devel package

4
samtools.yaml Normal file
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@ -0,0 +1,4 @@
version_control: github
src_repo: samtools/samtools
tag_prefix: ^
separator: .