64 lines
2.0 KiB
RPMSpec
64 lines
2.0 KiB
RPMSpec
Name: ncbi-blast
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Version: 2.12.0
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Release: 4
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Summary: NCBI BLAST finds regions of similarity between biological sequences.
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License: Public Domain
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URL: https://blast.ncbi.nlm.nih.gov/Blast.cgi
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Source0: https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.12.0/ncbi-blast-2.12.0+-src.tar.gz
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%ifarch riscv64
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Patch0: add-riscv-support.patch
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%endif
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BuildRequires: lmdb lmdb-devel gcc-c++ make
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%description
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The NCBI Basic Local Alignment Search Tool (BLAST) finds regions of
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local similarity between sequences. The program compares nucleotide or
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protein sequences to sequence databases and calculates the statistical
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significance of matches. BLAST can be used to infer functional and
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evolutionary relationships between sequences as well as help identify
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members of gene families.
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%prep
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%autosetup -n %{name}-%{version}+-src -p1
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%ifarch loongarch64
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%_update_config_guess
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%_update_config_sub
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%endif
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%build
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cd c++
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export CFLAGS="%{build_cflags}"
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export CXXFLAGS="%{build_cxxflags}"
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export LDFLAGS="%{build_ldflags}"
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./configure
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cd ReleaseMT/build
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sed -i "s/-fPIC/-fPIC -g/g" Makefile.mk
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%make_build all_r
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%install
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install -d %{buildroot}%{_bindir}
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install -d %{buildroot}%{_includedir}/ncbi-blast
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install -d %{buildroot}%{_libdir}/ncbi-blast
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rm -rf c++/ReleaseMT/bin/windowmasker_2.2.22_adapter.py
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install -m 0755 c++/ReleaseMT/bin/* %{buildroot}%{_bindir}/
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cp -r c++/ReleaseMT/inc/* %{buildroot}%{_includedir}/ncbi-blast
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cp c++/ReleaseMT/lib/* %{buildroot}%{_libdir}/ncbi-blast/
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%files
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%defattr(-,root,root)
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%_bindir/*
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%{_includedir}/ncbi-blast/*
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%{_libdir}/ncbi-blast/*
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%changelog
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* Wed May 31 2023 huajingyun <huajingyun@loongson.cn> - 2.12.0-4
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- update config.guess and config.sub for loongarch64
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* Thu Nov 24 2022 misaka00251 <liuxin@iscas.ac.cn> - 2.12.0-3
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- Add riscv support
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* Tue Feb 15 2022 herengui <herengui@uniontech.com> - 2.12.0-2
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- add missing buildrquires.
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* Wed Jul 28 2021 huanghaitao <huanghaitao8@huawei.com> - 2.12.0-1
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- package init
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