diff --git a/0003-soften-version-check.patch b/0003-soften-version-check.patch new file mode 100644 index 0000000..6d75cc6 --- /dev/null +++ b/0003-soften-version-check.patch @@ -0,0 +1,13 @@ +diff --git mpich-3.2/./src/binding/cxx/mpicxx.h.in~ mpich-3.2/./src/binding/cxx/mpicxx.h.in +index 375c081e0e..24f1d6c2cc 100644 +--- mpich-3.2/./src/binding/cxx/mpicxx.h.in~ ++++ mpich-3.2/./src/binding/cxx/mpicxx.h.in +@@ -17,7 +17,7 @@ + // between 3.2.3 and 3.4.3 (!!) Normally such changes + // should only occur at major releases (e.g., version 3 to 4) + #ifdef __GNUC__ +-# if __GNUC__ >= @GNUCXX_VERSION@ ++# if __GNUC__ >= @GNUCXX_VERSION@ && @GNUCXX_VERSION@ == 3 + # if __GNUC_MINOR__ > 2 && @GNUCXX_MINORVERSION@ == 2 + # error 'Please use the same version of GCC and g++ for compiling MPICH and user MPI programs' + # endif diff --git a/README.en.md b/README.en.md deleted file mode 100644 index e540a4d..0000000 --- a/README.en.md +++ /dev/null @@ -1,36 +0,0 @@ -# mpich - -#### Description -{**When you're done, you can delete the content in this README and update the file with details for others getting started with your repository**} - -#### Software Architecture -Software architecture description - -#### Installation - -1. xxxx -2. xxxx -3. xxxx - -#### Instructions - -1. xxxx -2. xxxx -3. xxxx - -#### Contribution - -1. Fork the repository -2. Create Feat_xxx branch -3. Commit your code -4. Create Pull Request - - -#### Gitee Feature - -1. You can use Readme\_XXX.md to support different languages, such as Readme\_en.md, Readme\_zh.md -2. Gitee blog [blog.gitee.com](https://blog.gitee.com) -3. Explore open source project [https://gitee.com/explore](https://gitee.com/explore) -4. The most valuable open source project [GVP](https://gitee.com/gvp) -5. The manual of Gitee [https://gitee.com/help](https://gitee.com/help) -6. The most popular members [https://gitee.com/gitee-stars/](https://gitee.com/gitee-stars/) diff --git a/README.md b/README.md deleted file mode 100644 index df2647a..0000000 --- a/README.md +++ /dev/null @@ -1,39 +0,0 @@ -# mpich - -#### 介绍 -{**以下是码云平台说明，您可以替换此简介** -码云是 OSCHINA 推出的基于 Git 的代码托管平台（同时支持 SVN）。专为开发者提供稳定、高效、安全的云端软件开发协作平台 -无论是个人、团队、或是企业，都能够用码云实现代码托管、项目管理、协作开发。企业项目请看 [https://gitee.com/enterprises](https://gitee.com/enterprises)} - -#### 软件架构 -软件架构说明 - - -#### 安装教程 - -1. xxxx -2. xxxx -3. xxxx - -#### 使用说明 - -1. xxxx -2. xxxx -3. xxxx - -#### 参与贡献 - -1. Fork 本仓库 -2. 新建 Feat_xxx 分支 -3. 提交代码 -4. 新建 Pull Request - - -#### 码云特技 - -1. 使用 Readme\_XXX.md 来支持不同的语言，例如 Readme\_en.md, Readme\_zh.md -2. 码云官方博客 [blog.gitee.com](https://blog.gitee.com) -3. 你可以 [https://gitee.com/explore](https://gitee.com/explore) 这个地址来了解码云上的优秀开源项目 -4. [GVP](https://gitee.com/gvp) 全称是码云最有价值开源项目，是码云综合评定出的优秀开源项目 -5. 码云官方提供的使用手册 [https://gitee.com/help](https://gitee.com/help) -6. 码云封面人物是一档用来展示码云会员风采的栏目 [https://gitee.com/gitee-stars/](https://gitee.com/gitee-stars/) diff --git a/mpich-3.2.1.tar.gz b/mpich-3.2.1.tar.gz new file mode 100644 index 0000000..7ea2e00 Binary files /dev/null and b/mpich-3.2.1.tar.gz differ diff --git a/mpich-modules.patch b/mpich-modules.patch new file mode 100644 index 0000000..d8d4ab2 --- /dev/null +++ b/mpich-modules.patch @@ -0,0 +1,33 @@ +--- mpich-3.2.1/src/packaging/envmods/mpich.module.in.orig 2017-11-11 03:19:44.000000000 +0100 ++++ mpich-3.2.1/src/packaging/envmods/mpich.module.in 2018-04-04 14:14:16.553160669 +0200 +@@ -3,12 +3,23 @@ + # MPICH module for use with 'environment-modules' package: + # + ++# Only allow one mpi module to be loaded at a time ++conflict mpi ++ + # Define prefix so PATH and MANPATH can be updated. +-setenv prefix @prefix@ +-setenv exec_prefix @exec_prefix@ ++setenv MPI_BIN @LIBDIR@/bin ++setenv MPI_SYSCONFIG @sysconfdir@/@MPINAME@-@ARCH@ ++setenv MPI_FORTRAN_MOD_DIR @fortranmoddir@/@MPINAME@ ++setenv MPI_INCLUDE @includedir@ ++setenv MPI_LIB @libdir@ ++setenv MPI_MAN @mandir@ ++setenv MPI_PYTHON_SITEARCH @py2sitearch@/@MPINAME@ ++setenv MPI_PYTHON2_SITEARCH @py2sitearch@/@MPINAME@ ++setenv MPI_PYTHON3_SITEARCH @py3sitearch@/@MPINAME@ ++setenv MPI_COMPILER @MPINAME@-@ARCH@ ++setenv MPI_SUFFIX _@MPINAME@ ++setenv MPI_HOME @LIBDIR@ + prepend-path PATH @bindir@ +-prepend-path MANPATH @mandir@ +- +-# Undefine prefix and exec_prefix which are too generic environment variables. +-unsetenv prefix +-unsetenv exec_prefix ++prepend-path LD_LIBRARY_PATH @libdir@ ++prepend-path MANPATH :@mandir@ ++prepend-path PKG_CONFIG_PATH @LIBDIR@/lib/pkgconfig diff --git a/mpich.macros b/mpich.macros new file mode 100644 index 0000000..85443f4 --- /dev/null +++ b/mpich.macros @@ -0,0 +1,7 @@ +%_mpich_load \ + . /etc/profile.d/modules.sh; \ + module load mpi/mpich-%{_arch}; \ + export CFLAGS="$CFLAGS %{optflags}"; +%_mpich_unload \ + . /etc/profile.d/modules.sh; \ + module unload mpi/mpich-%{_arch}; diff --git a/mpich.pth.py2 b/mpich.pth.py2 new file mode 100644 index 0000000..a2dc353 --- /dev/null +++ b/mpich.pth.py2 @@ -0,0 +1 @@ +import sys, os; s = os.getenv('MPI_PYTHON2_SITEARCH'); s and (s in sys.path or sys.path.append(s)) diff --git a/mpich.pth.py3 b/mpich.pth.py3 new file mode 100644 index 0000000..ced8c64 --- /dev/null +++ b/mpich.pth.py3 @@ -0,0 +1 @@ +import sys, os; s = os.getenv('MPI_PYTHON3_SITEARCH'); s and (s in sys.path or sys.path.append(s)) diff --git a/mpich.spec b/mpich.spec new file mode 100644 index 0000000..7695167 --- /dev/null +++ b/mpich.spec @@ -0,0 +1,220 @@ +Summary: A high-performance implementation of MPI +Name: mpich +Version: 3.2.1 +Release: 9 +License: MIT +URL: http://www.mpich.org/ +Source0: http://www.mpich.org/static/downloads/%{version}/mpich-%{version}.tar.gz +Source1: mpich.macros +Source2: mpich.pth.py2 +Source3: mpich.pth.py3 +Patch0: mpich-modules.patch +Patch3: 0003-soften-version-check.patch + +BuildRequires: gcc gcc-c++ gcc-gfortran hwloc-devel >= 1.8 valgrind-devel +BuildRequires: python2-devel python3-devel rpm-mpi-hooks automake +Provides: mpi +Provides: mpich2 = %{version} +Obsoletes: mpich2 < 3.0 +Requires: environment(modules) + +%description +MPICH is a high performance and widely portable implementation +of the Message Passing Interface (MPI) standard. + +%package autoload +Summary: Load mpich automatically into profile +Requires: mpich = %{version}-%{release} +Provides: mpich2-autoload = 3.0.1 +Obsoletes: mpich2-autoload < 3.0 + +%description autoload +This package contains profile files that make mpich automatically loaded. + +%package devel +Summary: Development files for mpich +Requires: mpich = %{version}-%{release} pkgconfig gcc-gfortran rpm-mpi-hooks +Provides: mpich-devel-static = %{version}-%{release} +Provides: mpich2-devel = 3.0.1 +Obsoletes: mpich2-devel < 3.0 + +%description devel +Contains development headers and libraries for mpich. + +%package help +Summary: Documentations and examples for mpich +BuildArch: noarch +Requires: mpich-devel = %{version}-%{release} +Provides: mpich2-doc = 3.0.1 +Provides: mpich-doc = %{version}-%{release} +Obsoletes: mpich2-doc < 3.0 +Obsoletes: mpich-doc < %{version}-%{release} + +%description help +Contains documentations, examples and man-pages for mpich. + +%package -n python2-mpich +Summary: mpich support for Python 2 + +%description -n python2-mpich +mpich support for Python 2. + +%package -n python3-mpich +Summary: mpich support for Python 3 + +%description -n python3-mpich +mpich support for Python 3. + +%{!?opt_cc: %global opt_cc gcc} +%{!?opt_fc: %global opt_fc gfortran} +%{!?opt_f77: %global opt_f77 gfortran} + +%{!?opt_cc_cflags: %global opt_cc_cflags %{optflags}} +%{!?opt_fc_fflags: %global opt_fc_fflags %{optflags}} +%{!?opt_f77_fflags: %global opt_f77_fflags %{optflags}} + +%ifarch aarch64 +%global m_option "" +%else +%global m_option -m64 +%endif +%global selected_channels ch3:nemesis +%global XFLAGS -fPIC + +%prep +%autosetup -p1 + +%build +%configure \ + --enable-sharedlibs=gcc \ + --enable-shared \ + --enable-static=no \ + --enable-lib-depend \ + --disable-rpath \ + --disable-silent-rules \ + --enable-fc \ + --with-device=%{selected_channels} \ + --with-pm=hydra:gforker \ + --includedir=%{_includedir}/mpich-%{_arch} \ + --bindir=%{_libdir}/mpich/bin \ + --libdir=%{_libdir}/mpich/lib \ + --datadir=%{_datadir}/mpich \ + --mandir=%{_mandir}/mpich-%{_arch} \ + --docdir=%{_datadir}/mpich/doc \ + --htmldir=%{_datadir}/mpich/doc \ + --with-hwloc-prefix=system \ + FC=%{opt_fc} \ + F77=%{opt_f77} \ + CFLAGS="%{m_option} -O2 %{?XFLAGS}" \ + CXXFLAGS="%{m_option} -O2 %{?XFLAGS}" \ + FCFLAGS="%{m_option} -O2 %{?XFLAGS}" \ + FFLAGS="%{m_option} -O2 %{?XFLAGS}" \ + LDFLAGS='-Wl,-z,noexecstack' \ + MPICHLIB_CFLAGS="%{?opt_cc_cflags}" \ + MPICHLIB_CXXFLAGS="%{optflags}" \ + MPICHLIB_FCFLAGS="%{?opt_fc_fflags}" \ + MPICHLIB_FFLAGS="%{?opt_f77_fflags}" +# MPICHLIB_LDFLAGS='-Wl,-z,noexecstack' \ +# MPICH_MPICC_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ +# MPICH_MPICXX_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ +# MPICH_MPIFC_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ +# MPICH_MPIF77_FLAGS="%{m_option} -O2 %{?XFLAGS}" +# --with-openpa-prefix=embedded \ +# FCFLAGS="%{?opt_fc_fflags} -I%{_fmoddir}/mpich %{?XFLAGS}" \ + +sed -r -i 's|^hardcode_libdir_flag_spec=.*|hardcode_libdir_flag_spec=""|g' libtool +sed -r -i 's|^runpath_var=LD_RUN_PATH|runpath_var=DIE_RPATH_DIE|g' libtool +sed -i -e 's| -shared | -Wl,--as-needed\0|g' libtool + +%make_build V=1 + +%install +%make_install + +mkdir -p %{buildroot}%{_fmoddir}/mpich +mv %{buildroot}%{_includedir}/mpich-*/*.mod %{buildroot}%{_fmoddir}/mpich/ +sed -r -i 's|^modincdir=.*|modincdir=%{_fmoddir}/mpich|' %{buildroot}%{_libdir}/mpich/bin/mpifort + +mkdir -p %{buildroot}%{_sysconfdir}/modulefiles/mpi +sed -r 's|%{_bindir}|%{_libdir}/mpich/bin|; + s|@LIBDIR@|%{_libdir}/mpich|; + s|@MPINAME@|mpich|; + s|@py2sitearch@|%{python2_sitearch}|; + s|@py3sitearch@|%{python3_sitearch}|; + s|@ARCH@|%{_arch}|; + s|@fortranmoddir@|%{_fmoddir}|; + ' \ + %{buildroot}%{_sysconfdir}/modulefiles/mpi/mpich-%{_arch} + +mkdir -p %{buildroot}%{_sysconfdir}/profile.d +cat >%{buildroot}%{_sysconfdir}/profile.d/mpich-%{_arch}.sh < - 3.2.1-9 +- Package init