diff --git a/src/bundles.h b/src/bundles.h
index e7caf06..6fb8681 100644
--- a/src/bundles.h
+++ b/src/bundles.h
@@ -12,7 +12,7 @@
 #ifdef HAVE_CONFIG_H
 #include <config.h>
 #endif
-#include <boost/bind.hpp>
+#include <boost/bind/bind.hpp>
 #include <boost/random.hpp>
 #include <vector>
 #include <numeric>
diff --git a/src/cuffquant.cpp b/src/cuffquant.cpp
index 2634e98..5c5ffd2 100644
--- a/src/cuffquant.cpp
+++ b/src/cuffquant.cpp
@@ -43,6 +43,7 @@ vector<string> sample_labels;
 
 using namespace std;
 using namespace boost;
+using namespace boost::placeholders;
 
 // We leave out the short codes for options that don't take an argument
 #if ENABLE_THREADS
diff --git a/src/transitive_closure.h b/src/transitive_closure.h
index fc23976..d982396 100644
--- a/src/transitive_closure.h
+++ b/src/transitive_closure.h
@@ -27,7 +27,7 @@
 #include <algorithm> // for std::min and std::max
 #include <functional>
 #include <boost/config.hpp>
-#include <boost/bind.hpp>
+#include <boost/bind/bind.hpp>
 #include <boost/graph/vector_as_graph.hpp>
 #include <boost/graph/strong_components.hpp>
 #include <boost/graph/topological_sort.hpp>
@@ -35,6 +35,7 @@
 #include <boost/graph/named_function_params.hpp>
 	
 using namespace boost;
+using namespace boost::placeholders;
 
 typedef uint16_t v_id_size_type;